Datasets

Gastric scRNAseq

Cellranger outputs from single-cell RNA sequencing of gastric cancer, metaplasia, paired normal tissue and PBMCs:

• Unfiltered output: gastric_scRNAseq_raw.zip
• Filtered output: gastric_scRNAseq_filtered.zip
• Readme file: gastric_scRNAseq.README.txt

For more details see:  Single cell genomic characterization reveals the cellular reprogramming of the gastric tumor microenvironment. Sathe A, Grimes SM, Lau BT, Chen J, Suarez C, Huang RJ, et al. Clin Cancer Res 2020doi 10.1158/1078-0432.CCR-19-3231.

Lymphoma scRNAseq

Cellranger outputs from single-cell RNA sequencing of follicular lymphoma tumor cells and tumor-infiltrating lymphocytes:

• lymphoma_cellranger.zip
• tonsil_cellranger.zip
• PBMC_cellranger.zip

For more details see:  Single-cell RNA-Seq of follicular lymphoma reveals malignant B-cell types and coexpression of T-cell immune checkpoints; Andor N, Simonds EF, Czerwinski DK, Chen J, Grimes SM, Wood-Bouwens C, Zheng GXY, Kubit MA, Greer S, Weiss WA, Levy R, Ji HP: Blood, 2019 Mar 7;133(10):1119-1129.